Files in pjbouchet/espresso
Bayesian Inference For Multi-Species Behavioural Dose-response Functions
.DS_Store
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/.DS_Store
R/RcppExports.R
R/compare_models.R
R/compile_rjMCMC.R
R/configure_rjMCMC.R
R/create_groups.R
R/create_report.R
R/espresso-package.R
R/example_brs.R
R/gibbs.R
R/houser_dose.R
R/jacobson_dose.R
R/moretti_dose.R
R/plot.dose_response.R
R/plot.gvs.R
R/plot.rjtrace.R
R/plot_phase.R
R/read_data.R
R/run_rjMCMC.R
R/setup_rjMCMC.R
R/simulate_data.R
R/species_brs.R
R/summary.brsdata.R
R/summary.gvs.R
R/summary.rjtrace.R
R/sysdata.rda
R/trace_rjMCMC.R
R/undo_groups.R
R/update_rjMCMC.R
R/utils.R
README.Rmd
README.md
Rprof.out
data/example_brs.rda
data/houser_dose.rda
data/jacobson_dose.rda
data/moretti_dose.rda
data/species_brs.rda
docs/404.html
docs/articles/espresso.html
docs/articles/espresso_files/figure-html/doseresp1-1.png
docs/articles/espresso_files/figure-html/doseresp2-1.png
docs/articles/espresso_files/figure-html/doseresp3-1.png
docs/articles/espresso_files/figure-html/doseresp4-1.png
docs/articles/espresso_files/figure-html/doserespbymodel-1.png
docs/articles/espresso_files/figure-html/plotmcmc-1.png
docs/articles/espresso_files/figure-html/plotmcmc-2.png
docs/articles/espresso_files/figure-html/plotmcmc-3.png
docs/articles/espresso_files/figure-html/plotmcmc-4.png
docs/articles/espresso_files/figure-html/plotmcmcex-1.png
docs/articles/espresso_files/figure-html/summarymcmc-1.png
docs/articles/espresso_files/figure-html/summarymcmc-2.png
docs/articles/espresso_files/figure-html/summarymcmc-3.png
docs/articles/espresso_files/figure-html/unnamed-chunk-19-1.png
docs/articles/espresso_files/figure-html/unnamed-chunk-19-2.png
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docs/articles/espresso_files/figure-html/unnamed-chunk-19-4.png
docs/articles/espresso_files/figure-html/unnamed-chunk-19-5.png
docs/articles/espresso_files/figure-html/unnamed-chunk-20-1.png
docs/articles/espresso_files/figure-html/unnamed-chunk-20-2.png
docs/articles/espresso_files/figure-html/unnamed-chunk-20-3.png
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docs/articles/espresso_files/figure-html/unnamed-chunk-20-5.png
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docs/articles/espresso_files/figure-html/unnamed-chunk-28-1.png
docs/articles/espresso_files/figure-html/unnamed-chunk-30-1.png
docs/articles/espresso_files/header-attrs-2.11/header-attrs.js
docs/articles/espresso_files/header-attrs-2.5/header-attrs.js
docs/articles/index.html
docs/articles/rjmcmc_dag_biphasic.png
docs/articles/rjmcmc_dag_monophasic.png
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/extra.css
docs/index.html
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/pkgdown/extra.css
docs/reference/Rplot001.png
docs/reference/TL.html
docs/reference/compare_MCMC.html
docs/reference/compare_models.html
docs/reference/compile_rjMCMC.html
docs/reference/configure_rjMCMC.html
docs/reference/create_groups.html
docs/reference/create_report.html
docs/reference/dtnorm.html
docs/reference/espresso.html
docs/reference/example_brs.html
docs/reference/figures/espresso-hex.afdesign
docs/reference/figures/espresso-hex.jpg
docs/reference/figures/espresso-hex.png
docs/reference/gibbs.html
docs/reference/hexa2hex.html
docs/reference/houser_dose.html
docs/reference/index.html
docs/reference/jacobson_dose.html
docs/reference/likelihood.html
docs/reference/moretti_dose.html
docs/reference/normal_prior.html
docs/reference/plot.dose_response.html
docs/reference/plot.gvs.html
docs/reference/plot.rjtrace.html
docs/reference/plot_phase.html
docs/reference/print.dose_response.html
docs/reference/print.gvs.html
docs/reference/print.rjtrace.html
docs/reference/prob_covariates.html
docs/reference/propdens_ff.html
docs/reference/propdens_mh.html
docs/reference/propdens_rj.html
docs/reference/proposal_ff.html
docs/reference/proposal_mh.html
docs/reference/proposal_rj.html
docs/reference/proposal_t.ij.html
docs/reference/propose_jump.html
docs/reference/range_finder.html
docs/reference/read_data.html
docs/reference/rtnorm.html
docs/reference/run_rjMCMC.html
docs/reference/setup_rjMCMC.html
docs/reference/simulate_data.html
docs/reference/species_brs.html
docs/reference/summary.brsdata.html
docs/reference/summary.gvs.html
docs/reference/summary.rjtrace.html
docs/reference/trace_rjMCMC.html
docs/reference/undo_groups.html
docs/reference/uniform_prior.html
docs/reference/update_rjMCMC.html
docs/sitemap.xml
espresso.Rproj
inst/.DS_Store
inst/REFERENCES.bib
inst/biphasic_tests.R
inst/check_biphasic.R
inst/create_data.R
inst/espresso_workflow.afdesign
inst/sim_mono_biphasic.R
inst/vignette_code.R
man/.DS_Store
man/TL.Rd
man/compare_models.Rd
man/compile_rjMCMC.Rd
man/configure_rjMCMC.Rd
man/create_groups.Rd
man/create_report.Rd
man/espresso.Rd
man/example_brs.Rd
man/figures/espresso-hex.afdesign
man/figures/espresso-hex.jpg
man/figures/espresso-hex.png
man/gibbs.Rd
man/hexa2hex.Rd
man/houser_dose.Rd
man/jacobson_dose.Rd
man/likelihood.Rd
man/moretti_dose.Rd
man/normal_prior.Rd
man/plot.dose_response.Rd
man/plot.gvs.Rd
man/plot.rjtrace.Rd
man/plot_phase.Rd
man/print.dose_response.Rd
man/print.gvs.Rd
man/print.rjtrace.Rd
man/prob_covariates.Rd
man/propdens_ff.Rd
man/propdens_mh.Rd
man/propdens_rj.Rd
man/proposal_ff.Rd
man/proposal_rj.Rd
man/proposal_t.ij.Rd
man/propose_jump.Rd
man/range_finder.Rd
man/read_data.Rd
man/run_rjMCMC.Rd
man/setup_rjMCMC.Rd
man/simulate_data.Rd
man/species_brs.Rd
man/summary.brsdata.Rd
man/summary.gvs.Rd
man/summary.rjtrace.Rd
man/trace_rjMCMC.Rd
man/undo_groups.Rd
man/uniform_prior.Rd
man/update_rjMCMC.Rd
pkgdown/extra.css
src/RcppExports.cpp
src/functions.cpp
vignettes/.gitignore
vignettes/espresso.Rmd
vignettes/espresso.csl
vignettes/espresso_workflow.jpg
vignettes/images/paste-675B46C4.png
vignettes/rjmcmc_dag_biphasic.png
vignettes/rjmcmc_dag_monophasic.png
