MassSqliteEntry: Mass spectra SQLite entry class.

MassSqliteEntryR Documentation

Mass spectra SQLite entry class.

Description

This is the entry class for a Mass spectra SQLite database.

Super classes

biodb::BiodbEntry -> biodb::BiodbListEntry -> MassSqliteEntry

Methods

Public methods

Inherited methods

Method clone()

The objects of this class are cloneable with this method.

Usage
MassSqliteEntry$clone(deep = FALSE)
Arguments
deep

Whether to make a deep clone.

See Also

Super class BiodbListEntry.

Examples

# Create an instance with default settings:
mybiodb <- biodb::newInst()

# Get path to LCMS database example file
lcmsdb <- system.file("extdata", "massbank_extract.sqlite", package="biodb")

# Create a connector
conn <- mybiodb$getFactory()$createConn('mass.sqlite', url=lcmsdb)

# Get an entry
e <- conn$getEntry('34.pos.col12.0.78')

# Terminate instance.
mybiodb$terminate()


pkrog/biodb documentation built on Nov. 29, 2022, 4:24 a.m.