Files in pkrog/biodb
biodb, a library and a development framework for connecting to chemical and biological databases

.Rbuildignore
.gitattributes
.gitignore
.gitmodules
.travis.yml
DESCRIPTION
LICENSE
Makefile
NAMESPACE
NEWS
R/Biodb.R R/BiodbChildObject.R R/BiodbCompounddbConn.R R/BiodbConfig.R R/BiodbConn.R R/BiodbConnBase.R R/BiodbConnObserver.R R/BiodbCsvEntry.R R/BiodbDbInfo.R R/BiodbDbsInfo.R R/BiodbDownloadable.R R/BiodbEditable.R R/BiodbEntry.R R/BiodbEntryField.R R/BiodbEntryFields.R R/BiodbErrorReporter.R R/BiodbFactory.R R/BiodbHtmlEntry.R R/BiodbInfoReporter.R R/BiodbJsonEntry.R R/BiodbListEntry.R R/BiodbLogger.R R/BiodbMassdbConn.R R/BiodbObject.R R/BiodbObserver.R R/BiodbPersitentCache.R R/BiodbRemotedbConn.R R/BiodbRequest.R R/BiodbRequestScheduler.R R/BiodbRequestSchedulerRule.R R/BiodbSdfEntry.R R/BiodbSqlBinaryOp.R R/BiodbSqlExpr.R R/BiodbSqlField.R R/BiodbSqlList.R R/BiodbSqlLogicalOp.R R/BiodbSqlQuery.R R/BiodbSqlValue.R R/BiodbTxtEntry.R R/BiodbUrl.R R/BiodbWarningReporter.R R/BiodbWritable.R R/BiodbXmlEntry.R R/CompCsvFileConn.R R/CompCsvFileEntry.R R/CsvFileConn.R R/MassCsvFileConn.R R/MassCsvFileEntry.R R/MassSqliteConn.R R/MassSqliteEntry.R R/generic_tests.R R/http_consts.R R/mass_fcts.R R/package.R R/spec-dist.R R/test_framework.R README.md
codecov.yml
inst/definitions.yml
inst/extdata/ChebiExConn.R inst/extdata/ChebiExEntry.R
inst/extdata/chebi_ex.yml
inst/extdata/chebi_ex_charge_parsing.yml
inst/extdata/chebi_ex_stars_field.yml
inst/extdata/chebi_extract.tsv
inst/extdata/chebi_extract_custom.csv
inst/extdata/chebi_extract_with_unknown_column.tsv
inst/extdata/expasy_enzyme_extract.tsv
inst/extdata/massbank_extract_lcms_1.sqlite
inst/extdata/massbank_extract_lcms_1.tsv
inst/extdata/massbank_extract_lcms_2.tsv
inst/extdata/massbank_extract_lcms_3.tsv
inst/extdata/massbank_extract_msms.tsv
inst/extdata/ms.tsv
inst/extdata/uniprot_extract.tsv
inst/features.tsv
inst/vignettes_inc.R
src/.gitignore
src/closeMatchPpm.c
src/registerDynamicSymbol.c
tests/.gitignore
tests/dockerfiles/conda_install_alpine.dockerfile
tests/dockerfiles/conda_install_centos.dockerfile
tests/dockerfiles/conda_install_ubuntu.dockerfile
tests/testthat.R
tests/testthat/res/entry-comp.csv.file-1018.json
tests/testthat/res/entry-mass.csv.file-A10.pos.colzz.5.69.json
tests/testthat/res/entry-mass.sqlite-A10.pos.colzz.5.69.json
tests/testthat/res/mass.csv.file-wrong_header.tsv
tests/testthat/res/mass.csv.file-wrong_nb_cols.tsv
tests/testthat/res/mass.csv.file.tsv
tests/testthat/test_001_abstract.R tests/testthat/test_005_assertions.R tests/testthat/test_007_url.R tests/testthat/test_010_object_printing.R tests/testthat/test_011_mass_fcts.R tests/testthat/test_015_observers.R tests/testthat/test_020_config.R tests/testthat/test_030_biodb.R tests/testthat/test_031_dbinfo.R tests/testthat/test_032_biodbentry.R tests/testthat/test_050_factory.R tests/testthat/test_060_entry_field.R tests/testthat/test_080_scheduler.R tests/testthat/test_099_extension.R tests/testthat/test_100_comp.csv.file.R tests/testthat/test_120_mass.csv.file.R tests/testthat/test_130_mass.sqlite.R tests/testthat/test_200_lcms_annotation.R vignettes/details.Rmd vignettes/entries.Rmd vignettes/in_house_compound_db.Rmd vignettes/in_house_mass_db.Rmd vignettes/intro.Rmd vignettes/new_connector.Rmd vignettes/new_entry_field.Rmd
vignettes/references.bib
pkrog/biodb documentation built on Jan. 21, 2021, 9:27 p.m.