runGenericTests: Run generic tests.

In pkrog/biodb: biodb, a library and a development framework for connecting to chemical and biological databases

Run generic tests.

Description

This function must be used in tests on all connector classes, before any specific tests.

Usage

runGenericTests(
  conn,
  pkgName,
  testRefFolder = NULL,
  opt = NULL,
  short = TRUE,
  long = FALSE,
  maxShortTestRefEntries = 1
)

Arguments

conn	A valid biodb connector.
pkgName	The name of your package.
testRefFolder	The folder where to find test reference files.
opt	A set of options to pass to the test functions.
short	Run short tests.
long	Run long tests.
maxShortTestRefEntries	The maximum number of reference entries to use in short tests.

Value

Nothing.

Examples

# Instantiate a Biodb instance for testing
biodb <- biodb::createBiodbTestInstance()

# Create a connector instance
lcmsdb <- system.file("extdata", "massbank_extract.tsv", package="biodb")
conn <- biodb$getFactory()$createConn('mass.csv.file', lcmsdb)

# Run generic tests

biodb::runGenericTests(conn)


# Terminate the instance
biodb$terminate()

pkrog/biodb documentation built on Nov. 29, 2022, 4:24 a.m.