Description Usage Format Source References Examples
Data from the ENCODE Consortium of H3K36me3 ChIP-seq experiments (2 technical
replicates each) of GM12878, H1-hESC, and HepG2 cell lines from chromosome 2.
PCR duplicates were removed with 'samtools markdup'. Low quality reads were removed with
'samtools view -q 10'. Read counts were tabulated using mixNBHMMDataSetFromBam
.
1 |
RangedSummarizedExperiment
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM733679 https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM733725 https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM733685
doi: 10.1093/nar/gkx1081
1 2 |
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