Description Usage Arguments Value Author(s) References Examples
View source: R/summarizePeaks.R
'summarizePeaks()' imports the output from 'mixNBHMM()' and outputs a set of differential peaks for a given FDR control threshold (or from the Viterbi sequence of HMM states).
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object |
a mixNBHMMDataSet |
type |
either 'viterbi' (default) or an FDR control threshold (e.g. 0.05) |
name |
either |
path |
either |
description |
either |
A GRanges object with differential peak calls in BED 6+3 format
Pedro L. Baldoni, pedrobaldoni@gmail.com
https://github.com/plbaldoni/mixNBHMM
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