API for plevritis-lab/CELESTA
Cell type identification with spatial information
| Global functions | |
|---|---|
| AssignCellTypes | Man page Source code |
| AssignCells | Man page Source code |
| BuildSigmoidFunction | Man page Source code |
| CalcMarkerActivationProbability | Man page Source code |
| CalculateBeta | Man page Source code |
| CalculateIndexCellProb | Man page Source code |
| CalculateProbabilityDifference | Man page Source code |
| CalculateScores | Man page Source code |
| Celesta | Man page |
| Celesta-class | Man page |
| CountCellType | Man page Source code |
| CreateCelestaObject | Man page Source code |
| FilterArtifactCells | Man page Source code |
| FilterCells | Man page Source code |
| FindCellsToCheck | Man page Source code |
| FindCellsWithId | Man page Source code |
| FitGmmModel | Man page Source code |
| GetCoords | Man page Source code |
| GetDistFromNearestAssignedCells | Man page Source code |
| GetFinalInferredCellTypes | Man page Source code |
| GetInitialPriorMatrix | Man page Source code |
| GetMarkerExpMatrix | Man page Source code |
| GetNeighborInfo | Man page Source code |
| GetPriorInfo | Man page Source code |
| GetScore | Man page Source code |
| InitializeCellAndScoringMatrices | Man page Source code |
| MarkQuestionableCells | Man page Source code |
| NeighborCellType | Man page Source code |
| PlotCellsAnyCombination | Man page Source code |
| PlotExpProb | Man page Source code |
| PlotSingleExpProb | Man page Source code |
| UpdatePriorMatrix | Man page Source code |
