MarkQuestionableCells: MarkQuestionableCells
In plevritis-lab/CELESTA: Cell type identification with spatial information
View source: R/CELESTA_functions.R
MarkQuestionableCells R Documentation
MarkQuestionableCells
Description
Determine if a cell is questionable.
A cell is questionable if all of its protein marker expressions are below
the lower_marker_threshold or above the high_marker_threshold.
Usage
MarkQuestionableCells(
cell_activation_prob,
high_marker_threshold,
low_marker_threshold
)
Arguments
cell_activation_prob
the protein marker expressions for a single cell
high_marker_threshold
upper bound used to filter out questionable
cells
low_marker_threshold
lower bound used to filter out questionable
cells
Value
whether a cell is questionable or not
plevritis-lab/CELESTA documentation built on Jan. 30, 2023, 3:32 p.m.
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View source: R/CELESTA_functions.R
| MarkQuestionableCells | R Documentation |
MarkQuestionableCells
Description
Determine if a cell is questionable.
A cell is questionable if all of its protein marker expressions are below
the lower_marker_threshold or above the high_marker_threshold.
Usage
MarkQuestionableCells( cell_activation_prob, high_marker_threshold, low_marker_threshold )
Arguments
cell_activation_prob |
the protein marker expressions for a single cell |
high_marker_threshold |
upper bound used to filter out questionable cells |
low_marker_threshold |
lower bound used to filter out questionable cells |
Value
whether a cell is questionable or not
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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