UpdatePriorMatrix: UpdatePriorMatrix

In plevritis-lab/CELESTA: Cell type identification with spatial information

UpdatePriorMatrix

Description

Updates prior knowledge matrix of the cell type signatures

Usage

UpdatePriorMatrix(
  current_pri_matrix,
  initial_pri_matrix,
  current_cell_type_assignment,
  marker_exp_prob,
  round,
  cell_type_num
)

Arguments

current_pri_matrix	the updated cell-type marker matrix
initial_pri_matrix	user defined cell-type marker matrix for a specific round
current_cell_type_assignment	the current cell type assignments (number_cells x total_rounds)
marker_exp_prob	the marker expression probability for each cell
round	the current round
cell_type_num	the cell types associated with the current round

Value

updates the prior knowledge matrix with information from cells assigned to each cell type

plevritis-lab/CELESTA documentation built on Jan. 30, 2023, 3:32 p.m.