Man pages for pmartinezarbizu/dada2pp
Miscelaneous Functions for Post-Processing dada2 Results.
| aggregateASV | Aggregate ASVs to putative species |
| ASV_outliers | remove ASV outliers using observed distribution |
| barp.table | Barplot Table |
| check.dist | Check for Distribution |
| commonASV | Most common ASVs |
| countTaxa | Count ASVs/OTUs per Taxon and Area |
| dada2pp-package | dada2pp: Miscelaneous Functions for Post-Processing dada2... |
| deepMeio | Example data deepMeio.RData for dada2pp |
| diverse.tt | Diversity Values Based on Taxon Table |
| match2table | Match Colors to Factors in a pal2table object |
| multiadonis | Multiple Adonis Test for Taxon Table |
| pal2table | Color Palette to Table |
| plot.barp_table | Method plot for object barp_table |
| plot.diverse_tt | Plot Method for divers.tt |
| plot.pal2table | Plots pal2table object |
| rarefyASV | rarefy and Plot ASV reads |
| ReadLengthPlot | Plot ASV read length frequency |
| stats.tt | Create statistics of Taxon table and reduces to target taxa |
| taxFromWorms | Retrieves Taxonomy from World Register of Marine Species |
