stats.tt | R Documentation |
As input takes a taxon table and some vectors with names of contaminants and non-target taxa
stats.tt(x, reads, by, cont, non_target)
x |
A taxon table with all its colums |
reads |
The subset of colums containing the reads |
by |
The column containing the grouping names |
cont |
A vector of contaminants taxon names |
non_target |
A vector of non-target taxon names |
TO be ...
Table with summary statistics, the vectors of contanimants, non-target and target taxa A reduced taxon table containing only target taxa
Pedro Martinez Arbizu
match2table
st.mf <- stats.tt(mf,mf[,9:27],mf$Group,cont,notbemet)
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