diverse.tt: Diversity Values Based on Taxon Table
In pmartinezarbizu/dada2pp: Miscelaneous Functions for Post-Processing dada2 Results.
diverse.tt R Documentation
Diversity Values Based on Taxon Table
Description
Calculate miscelaneous diversity values
Usage
diverse.tt(x, by, sample = floor(min(N) * 0.8), pal)
Arguments
x
community table
by
aggregating vector
sample
number of n for rarefaction (default is min(N)*0.8)
pal
Palette object from pal2table
Details
Returns parameters N= number of specimens, S= number of species,
H= Shannon index, J= Pielou's evenness and ES= estimated number od species for N =sample
Value
An object of class divers_tt
This object has a plot method
Author(s)
Pedro Martinez Arbizu
See Also
plot.diverse_tt
pmartinezarbizu/dada2pp documentation built on Feb. 7, 2024, 7:01 a.m.
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| diverse.tt | R Documentation |
Diversity Values Based on Taxon Table
Description
Calculate miscelaneous diversity values
Usage
diverse.tt(x, by, sample = floor(min(N) * 0.8), pal)
Arguments
x |
community table |
by |
aggregating vector |
sample |
number of n for rarefaction (default is min(N)*0.8) |
pal |
Palette object from pal2table |
Details
Returns parameters N= number of specimens, S= number of species, H= Shannon index, J= Pielou's evenness and ES= estimated number od species for N =sample
Value
An object of class divers_tt This object has a plot method
Author(s)
Pedro Martinez Arbizu
See Also
plot.diverse_tt
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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