rarefyASV: rarefy and Plot ASV reads
In pmartinezarbizu/dada2pp: Miscelaneous Functions for Post-Processing dada2 Results.
rarefyASV R Documentation
rarefy and Plot ASV reads
Usage
rarefyASV(x, step)
Arguments
x
ASV table
step
Step used to rarefy
Value
A plot
Author(s)
Pedro Martinez Arbizu
Examples
rr <- rarefyASV(deepMeio[,9:ncol(deepMeio)],step=200)
plot(rr)
#provide colors for groups of samples
plot(rr,col=c(rep('red',10),rep('green',9)))
pmartinezarbizu/dada2pp documentation built on Feb. 7, 2024, 7:01 a.m.
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| rarefyASV | R Documentation |
rarefy and Plot ASV reads
Usage
rarefyASV(x, step)
Arguments
x |
ASV table |
step |
Step used to rarefy |
Value
A plot
Author(s)
Pedro Martinez Arbizu
Examples
rr <- rarefyASV(deepMeio[,9:ncol(deepMeio)],step=200)
plot(rr)
#provide colors for groups of samples
plot(rr,col=c(rep('red',10),rep('green',9)))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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