PSCBSwrapper: Transforms and aligns PSCBS data followed by a joint...
In pneuvial/c3co: Cancer Cell Clonality using Copy-Number
Description
Usage
Arguments
Value
Description
Transforms and aligns PSCBS data followed by a joint segmentation
Usage
1
PSCBSwrapper(PSCBSdata, stat, align = FALSE)
Arguments
PSCBSdata
A list that contains PSCBS data
stat
"TCN" or "C1C2" parameter to segment the data.
If stat == "TCN", the segmentation will be done on TCN only.
align
If TRUE, the PSCBS list elements are expanded before
segmentation to have the exact same set of (chr, pos) loci, which is the
union of all elements. See alignLoci() for details.
Value
A list which contains the breakpoints by chromosome and also the
binning of TCN, C1, and C2.
pneuvial/c3co documentation built on May 25, 2019, 10:21 a.m.
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Description Usage Arguments Value
Description
Transforms and aligns PSCBS data followed by a joint segmentation
Usage
1 | PSCBSwrapper(PSCBSdata, stat, align = FALSE)
|
Arguments
PSCBSdata |
A list that contains PSCBS data |
stat |
|
align |
If |
Value
A list which contains the breakpoints by chromosome and also the binning of TCN, C1, and C2.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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