Description Usage Arguments Value
Plot the weight matrix
1 2 3 4 5 6 7 8 | Wplot(this, idxBest, rownamesW = NULL, col = NULL, margins = c(5, 7),
posLegend = NA, listPheno, colsPheno, colLegend, labelLegend,
cexCol = 1.5, ...)
## S4 method for signature 'c3coFit'
Wplot(this, idxBest, rownamesW = NULL, col = NULL,
margins = c(5, 7), posLegend = NA, listPheno, colsPheno, colLegend,
labelLegend, cexCol = 1.5, ...)
|
this |
An object of class c3coFit. |
idxBest |
A integer, the number of latent features. |
rownamesW |
A vector that contains identification of patients. |
col |
A vector that contains colors for the heatmap. |
margins |
A vector margins. |
posLegend |
Position of the legend to be passed to |
listPheno |
A matrix that contains details on phenotype for each patient. Could be location or time point of tumors for example. |
colsPheno |
Matrix that contains colors for each type of variable in phenotype. |
colLegend |
Colors for clinical data. |
labelLegend |
Labels for clinical data. |
cexCol |
Size of labels of columns by (default 1.5). |
... |
Other parameters to personalize heatmap (see |
A heatmap of W
.
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