Files in pneuvial/c3co
Cancer Cell Clonality using Copy-number

.travis.yml
DESCRIPTION
NAMESPACE
NEWS.md R/AllClass.R R/AllGenerics.R R/Facetswrapper.R R/PSCBSwrapper.R R/buidlSubclones.R R/c3co.R R/getW.R R/getWeightMatrix.R R/getZ.R R/heatmap.3.R R/mixSubclone.R R/plotFunctions.R R/positiveFusedLasso.R R/segmentData.R README.md
appveyor.yml
inst/CanopyComparison/runCanopy.R inst/Experiments/00.functions.R inst/Experiments/01.setup.R inst/Experiments/02.runMethods.R inst/Experiments/03.plotResults.R inst/Experiments/README.md inst/Figures/paperFig.R inst/GSE47077/R/00.preprocessing.R inst/GSE47077/R/01.CallGenotypes.R inst/GSE47077/R/02.TumorBoost.R inst/GSE47077/R/03.runC3co.R inst/GSE47077/R/04.figures.R
inst/GSE47077/data/minMaxposByCHR.rds
inst/GSE47077/results_c3co-RK29/featureData,p=2.rds
inst/GSE47077/results_c3co-RK29/featureData,p=3.rds
inst/GSE47077/results_c3co-RK29/featureData,p=4.rds
inst/GSE47077/results_c3co-RK29/featureData,p=5.rds
inst/GSE47077/results_c3co-RK29/featureData,p=6.rds
inst/GSE47077/results_c3co-RK29/featureData,p=7.rds
inst/GSE47077/results_c3co-RK29/featureData,p=8.rds
inst/GSE47077/results_c3co-RK29/segDat.rds
man/Facetswrapper.Rd man/PSCBSwrapper.Rd man/Wplot.Rd man/Zplot.Rd man/buildSubclones.Rd man/c3co.Rd man/c3coFit-class.Rd man/createZdf.Rd man/getWeightMatrix.Rd man/heatmap.3.Rd man/loadFacetsdata.Rd man/loadPSCBSdata.Rd man/mixSubclones.Rd man/posFused-class.Rd man/positive.fused.Rd man/pvePlot.Rd man/segmentData.Rd man/showC3coFit.Rd man/showPosFused.Rd tests/testthat.R tests/testthat/test_c3co.R vignettes/PSCBSwrapper.Rmd vignettes/c3co.Rmd
vignettes/c3co.bib
vignettes/img/features.png
vignettes/img/features2.png
vignettes/img/model.png
vignettes/img/model2.png
pneuvial/c3co documentation built on May 24, 2017, 8:57 a.m.