createZdf: Create a data frame to plot subclones

In pneuvial/c3co: Cancer Cell Clonality using Copy-Number

Description

Create a data frame to plot subclones

Usage

createZdf(this, chromosomes, idxBest, var = "TCN", verbose = FALSE)

## S4 method for signature 'c3coFit'
createZdf(this, chromosomes, idxBest, var = c("TCN",
  "Minor", "Major"), verbose = FALSE)

Arguments

this	An object of class c3coFit.
chromosomes	A vector that contains the focused chromosomes.
idxBest	A integer that is the best fitting of the data.
var	"TCN", "Minor" or "Major".
verbose	A logical value indicating whether to print extra information. Defaults to FALSE.

Value

A data frame to plot Latent profiles with ggplot2.

pneuvial/c3co documentation built on May 25, 2019, 10:21 a.m.