Description Usage Arguments Value
Function to extract high scoring regions for a particular group
1 2 | extract.high.scoring.locations(test.group, test.class, seqs, regions,
group.model, dictionary.file, bed.file = NULL, half.binding.width = 25)
|
test.group |
Group to be tested |
test.class |
Class of the group being tested |
seqs |
Sequences of examples belonging to group |
regions |
Genomic location of examples belonging to group |
group.model |
Logistic regression model for the particular group |
dictionary.file |
Dictionary file for the kernel build using |
bed.file |
Bed file for writing extracted regions |
half.binding.width |
Half of the enriched region size |
GRanges object of enriched regions
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