Description Usage Arguments Details Value
Function for finding motifs associate with each group
1 2 | group.motifs(res.dir, dictionary.file, no.cores = 1, min.examples = 25,
test.classes = c(1, -1), org = "hg19")
|
res.dir |
Directory with group lasso results |
dictionary.file |
Dictionary file for the kernel build using |
no.cores |
Number of cores for parallel processing |
min.examples |
Minimum examples for a group to be considered |
test.classes |
Group classes to be considered |
org |
Organism from which data was derived |
The motifs for all groups will be found under folder group_motifs. The summary of all groups and motifs will be written to group_motifs.html
GRanges object of enriched regions
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