fgsea_rank_contrasts: convert data frame into list of ranks

Description Usage Arguments See Also

View source: R/fgsea_utils.R

Description

convert data frame into list of ranks

Usage

1
fgsea_rank_contrasts(df, ids = "X1", score = "X2", contrast = "contrast")

Arguments

df

data frame

ids

column with ids

score

column with scores

contrast

column with contrast name.

See Also

Other fgsea: fgsea_leading_edge_too_char(), fgsea_msigdb_collections(), fgsea_msigdb(), fgsea_rank(), getMsigdbGenesets(), run_fgsea_for_allContrasts(), run_fgsea_for_allGeneSets()


protViz/fgcz.gsea.ora documentation built on Dec. 24, 2021, 9:47 a.m.