fgsea_msigdb: converts msigdb geneset to fgsea compatible
In protViz/prora: ORA, sigORA and GSEA functionalities for proteomic data
Description
Usage
Arguments
See Also
Description
converts msigdb geneset to fgsea compatible
Usage
1
fgsea_msigdb(msigdbgeneset)
Arguments
msigdbgeneset
msigdb geneset
See Also
Other fgsea:
fgsea_leading_edge_too_char(),
fgsea_msigdb_collections(),
fgsea_rank_contrasts(),
fgsea_rank(),
getMsigdbGenesets(),
run_fgsea_for_allContrasts(),
run_fgsea_for_allGeneSets()
protViz/prora documentation built on Dec. 12, 2021, 12:32 a.m.
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Description Usage Arguments See Also
Description
converts msigdb geneset to fgsea compatible
Usage
1 | fgsea_msigdb(msigdbgeneset)
|
Arguments
msigdbgeneset |
msigdb geneset |
See Also
Other fgsea:
fgsea_leading_edge_too_char(),
fgsea_msigdb_collections(),
fgsea_rank_contrasts(),
fgsea_rank(),
getMsigdbGenesets(),
run_fgsea_for_allContrasts(),
run_fgsea_for_allGeneSets()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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