batchPSMheader: Processes Mascot PSMs
In qzhang503/proteoQ: Processing and Informatic Analysis of Mass Spectrometrirc Data
batchPSMheader R Documentation
Processes Mascot PSMs
Description
Processes Mascot PSMs
Usage
batchPSMheader(
filename = NULL,
dat_dir = NULL,
TMT_plex = 10L,
proc_extdata = TRUE,
warns = TRUE
)
Arguments
filename
The name of a PSM file.
dat_dir
A character string to the working directory. The default is to
match the value under the global environment.
TMT_plex
Numeric; the multiplexity of TMT, i.e., 10, 11 etc.
proc_extdata
Logical; if TRUE, processes extended PSM outputs;
otherwise, skips them. Setting the value to FALSE allows bypassing
time-consuming steps.
warns
Logical; if TRUE, show warning message(s).
qzhang503/proteoQ documentation built on Dec. 14, 2024, 12:27 p.m.
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| batchPSMheader | R Documentation |
Processes Mascot PSMs
Description
Processes Mascot PSMs
Usage
batchPSMheader(
filename = NULL,
dat_dir = NULL,
TMT_plex = 10L,
proc_extdata = TRUE,
warns = TRUE
)
Arguments
filename |
The name of a PSM file. |
dat_dir |
A character string to the working directory. The default is to match the value under the global environment. |
TMT_plex |
Numeric; the multiplexity of TMT, i.e., 10, 11 etc. |
proc_extdata |
Logical; if TRUE, processes extended PSM outputs; otherwise, skips them. Setting the value to FALSE allows bypassing time-consuming steps. |
warns |
Logical; if TRUE, show warning message(s). |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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