calc_cover: Calculates protein percent coverage
In qzhang503/proteoQ: Processing and Informatic Analysis of Mass Spectrometrirc Data
calc_cover R Documentation
Calculates protein percent coverage
Description
Calculates protein percent coverage
Usage
calc_cover(df, id)
Arguments
df
The name of a primary data file. By default, it will be determined
automatically after matching the types of data and analysis with an
id among c("pep_seq", "pep_seq_mod", "prot_acc", "gene"). A
primary file contains normalized peptide or protein data and is among
c("Peptide.txt", "Peptide_pVal.txt", "Peptide_impNA_pVal.txt",
"Protein.txt", "Protein_pVal.txt", "protein_impNA_pVal.txt"). For analyses
require the fields of significance p-values, the df will be one of
c("Peptide_pVal.txt", "Peptide_impNA_pVal.txt", "Protein_pVal.txt",
"protein_impNA_pVal.txt").
id
Character string; one of pep_seq, pep_seq_mod,
prot_acc and gene.
qzhang503/proteoQ documentation built on Dec. 14, 2024, 12:27 p.m.
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| calc_cover | R Documentation |
Calculates protein percent coverage
Description
Calculates protein percent coverage
Usage
calc_cover(df, id)
Arguments
df |
The name of a primary data file. By default, it will be determined
automatically after matching the types of data and analysis with an
|
id |
Character string; one of |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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