calc_lfq_log2r: Helper: calculates LFQ log2FC.

calc_lfq_log2rR Documentation

Helper: calculates LFQ log2FC.

Description

For rows with single intensity values: original intensities kept but log2_R000 coerced from 0 to NA. This will keep single-value rows away from data alignment that are based on log2_R000. Otherwise, the alignment may be trapped to the spike at log2_R000 = 0.

Usage

calc_lfq_log2r(df, type, refChannels)

Arguments

df

A data frame.

type

The type of intensity data.

refChannels

The reference channels.


qzhang503/proteoQ documentation built on March 16, 2024, 5:27 a.m.