calc_lfq_log2r: Helper: calculates LFQ log2FC.
In qzhang503/proteoQ: Processing and Informatic Analysis of Mass Spectrometrirc Data
calc_lfq_log2r R Documentation
Helper: calculates LFQ log2FC.
Description
For rows with single intensity values: original intensities kept but
log2_R000 coerced from 0 to NA. This will keep single-value rows away
from data alignment that are based on log2_R000. Otherwise, the
alignment may be trapped to the spike at log2_R000 = 0.
Usage
calc_lfq_log2r(df, type, refChannels)
Arguments
df
A data frame.
type
The type of intensity data.
refChannels
The reference channels.
qzhang503/proteoQ documentation built on Dec. 14, 2024, 12:27 p.m.
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| calc_lfq_log2r | R Documentation |
Helper: calculates LFQ log2FC.
Description
For rows with single intensity values: original intensities kept but
log2_R000 coerced from 0 to NA. This will keep single-value rows away
from data alignment that are based on log2_R000. Otherwise, the
alignment may be trapped to the spike at log2_R000 = 0.
Usage
calc_lfq_log2r(df, type, refChannels)
Arguments
df |
A data frame. |
type |
The type of intensity data. |
refChannels |
The reference channels. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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