count_phosphopeps: Counts phospho.
In qzhang503/proteoQ: Processing and Informatic Analysis of Mass Spectrometrirc Data
count_phosphopeps R Documentation
Counts phospho.
Description
Not currently used.
Usage
count_phosphopeps(
filename = "Peptide.txt",
collapses = c("mn"),
rm_allna = FALSE,
pat_mod = "sty"
)
Arguments
filename
The file name of peptide table.
collapses
The modified residues to be collapsed with unmodified
counterparts.
rm_allna
Logical; if TRUE, removes data rows that are exclusively NA
across ratio columns of log2_R126 etc. The setting also applies to
log2_R000 in LFQ.
pat_mod
Pattern of modification
qzhang503/proteoQ documentation built on Dec. 14, 2024, 12:27 p.m.
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| count_phosphopeps | R Documentation |
Counts phospho.
Description
Not currently used.
Usage
count_phosphopeps(
filename = "Peptide.txt",
collapses = c("mn"),
rm_allna = FALSE,
pat_mod = "sty"
)
Arguments
filename |
The file name of peptide table. |
collapses |
The modified residues to be collapsed with unmodified counterparts. |
rm_allna |
Logical; if TRUE, removes data rows that are exclusively NA
across ratio columns of |
pat_mod |
Pattern of modification |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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