find_human_orthologs: Helper to find human orthologs

In qzhang503/proteoQ: Processing and Informatic Analysis of Mass Spectrometrirc Data

Helper to find human orthologs

Description

Helper to find human orthologs

Usage

find_human_orthologs(species, ortho_mart)

Arguments

species	Character string; the name of a species for the conveninent preparation of MSig data bases. The species available for the convenience feature is in one of c("human", "mouse", "rat") with "human" being the default. The argument is not required for other species; instead, users will provide values under arguments ortho_mart for the lookup of orthologs to human.
ortho_mart	Character string; a dataset name from useMart and/or listDatasets for the lookup of orthologs to human genes. For species in c("human", "mouse", "rat"), the value will be determined automatically unless otherwise specified.

Examples

res <- find_human_orthologs(mouse)

qzhang503/proteoQ documentation built on March 16, 2024, 5:27 a.m.