groupMZPSM1: Group PSMs
In qzhang503/proteoQ: Processing and Informatic Analysis of Mass Spectrometrirc Data
groupMZPSM1 R Documentation
Group PSMs
Description
For lfq_mbr = TRUE. Delayed pep_seq_modz to pep_seq_mod
conversion.
Usage
groupMZPSM1(df, group_psm_by = "pep_seq_mod", yco = 1e+07, sdco = sqrt(9))
Arguments
df
A Mzion PSM table.
group_psm_by
A character string specifying the method in PSM grouping.
At the pep_seq default, descriptive statistics will be calculated
based on the same pep_seq groups. At the pep_seq_mod
alternative, peptides with different variable modifications will be treated
as different species and descriptive statistics will be calculated based on
the same pep_seq_mod groups.
yco
An intensity cut-off.
sdco
A standard deviation cut-off.
qzhang503/proteoQ documentation built on Dec. 14, 2024, 12:27 p.m.
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| groupMZPSM1 | R Documentation |
Group PSMs
Description
For lfq_mbr = TRUE. Delayed pep_seq_modz to pep_seq_mod
conversion.
Usage
groupMZPSM1(df, group_psm_by = "pep_seq_mod", yco = 1e+07, sdco = sqrt(9))
Arguments
df |
A Mzion PSM table. |
group_psm_by |
A character string specifying the method in PSM grouping.
At the |
yco |
An intensity cut-off. |
sdco |
A standard deviation cut-off. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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