impRefNA: Impute NA for references

impRefNAR Documentation

Impute NA for references

Description

Impute NA for references

Usage

impRefNA(
  df,
  cols_ref,
  cols_smpl,
  refChannels,
  group_psm_by = "pep_seq_mod",
  sp_centers = NULL,
  imp_refs = FALSE,
  add_errs = FALSE
)

Arguments

df

A data frame.

cols_ref

The colume keys of reference IDs.

cols_smpl

The column keys of sample IDs.

refChannels

The reference channels.

group_psm_by

A key for PSM grouping.

sp_centers

A vector of log2FC centers for each species.

imp_refs

Logical; impute missing references or not.

add_errs

Logical; add normal errors or not.


qzhang503/proteoQ documentation built on Feb. 27, 2025, 8:34 a.m.