makeLFQSpecies: Makes the look-ups of shared peptides across species

In qzhang503/proteoQ: Processing and Informatic Analysis of Mass Spectrometrirc Data

Makes the look-ups of shared peptides across species

Description

Makes the look-ups of shared peptides across species

Usage

makeLFQSpecies(
  mbr_peps = NULL,
  mbr_sps = NULL,
  nms_sp,
  new_na_species = ".other",
  dat_dir = NULL,
  to_list = TRUE
)

Arguments

mbr_peps	A vector of pep_seq_modz.
mbr_sps	A vector of peptide species in the universe.
nms_sp	The names of species (for conversion from character strings to integers).
new_na_species	A replace value for NA species.
dat_dir	A working directory.
to_list	Logical; convert output to list or not.

qzhang503/proteoQ documentation built on Feb. 27, 2025, 8:34 a.m.