makeLFQXYTS: Prepare the XYTS matrices for LFQ

In qzhang503/proteoQ: Processing and Informatic Analysis of Mass Spectrometrirc Data

Prepare the XYTS matrices for LFQ

Description

Prepare the XYTS matrices for LFQ

Usage

makeLFQXYTS(
  pep_seq_modzs = NULL,
  pep_exp_mzs = NULL,
  pep_exp_ints = NULL,
  pep_apex_rets = NULL,
  pep_apex_scans = NULL,
  pep_apex_fwhm = NULL,
  pep_apex_n = NULL,
  add_colnames = TRUE
)

Arguments

pep_seq_modzs	List of peptide sequences with modifications and charge states.
pep_exp_mzs	List of m-over-z (X) values.
pep_exp_ints	List of intensity (Y) values.
pep_apex_rets	List of retention time (T) values.
pep_apex_scans	List of apex scan numbers (S).
pep_apex_fwhm	List of apex FWHM values.
pep_apex_n	List of apex lengths (number of MS2 scans).
add_colnames	Logical; add column names or not.

qzhang503/proteoQ documentation built on Feb. 27, 2025, 8:34 a.m.