newColnames: Make new column names
In qzhang503/proteoQ: Processing and Informatic Analysis of Mass Spectrometrirc Data

newColnames

R Documentation

Make new column names

According to the Sample_ID(s) in label_scheme.

newColnames(
  TMT_Set = 1L,
  df,
  label_scheme,
  pattern = "[RI][0-9]{3}[NC]{0,1}",
  group_ids = NULL
)

`TMT_Set`	Integer; the index of TMT experiment.
`df`	Data frame; log2FC data.
`label_scheme`	Experiment summary.
`pattern`	Regex pattern for capturing intensity and ratio columns.
`group_ids`	A character vector; for example, c("heavy", "light") that can be found from column `pep_group` in `df`; `group_ids` is NULL if column `pep_group` is not in `df`.

qzhang503/proteoQ documentation built on March 16, 2024, 5:27 a.m.

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