proc_obo: Helper to save 'obo' without header

In qzhang503/proteoQ: Processing and Informatic Analysis of Mass Spectrometrirc Data

Helper to save 'obo' without header

Description

Helper to save 'obo' without header

Usage

proc_obo(
  db_path,
  fn_obo,
  type = c("biological_process", "cellular_component", "molecular_function")
)

Arguments

db_path	Character string; the local path for database(s). The default is "~/proteoQ/dbs/go".
fn_obo	filename according to obo_url
type	Character vector. The name space in gene ontology to be included. The default is to include all in c("biological_process", "cellular_component", "molecular_function"). In the example of type = c("biological_process", "cellular_component"), terms of molecular_function will be excluded.

qzhang503/proteoQ documentation built on March 16, 2024, 5:27 a.m.