replace_na_genes: Replaces NA genes (not currently used)
In qzhang503/proteoQ: Processing and Informatic Analysis of Mass Spectrometrirc Data
replace_na_genes R Documentation
Replaces NA genes (not currently used)
Description
Replaces NA genes (not currently used)
Usage
replace_na_genes(df, acc_type)
Arguments
df
The name of a primary data file. By default, it will be determined
automatically after matching the types of data and analysis with an
id among c("pep_seq", "pep_seq_mod", "prot_acc", "gene"). A
primary file contains normalized peptide or protein data and is among
c("Peptide.txt", "Peptide_pVal.txt", "Peptide_impNA_pVal.txt",
"Protein.txt", "Protein_pVal.txt", "protein_impNA_pVal.txt"). For analyses
require the fields of significance p-values, the df will be one of
c("Peptide_pVal.txt", "Peptide_impNA_pVal.txt", "Protein_pVal.txt",
"protein_impNA_pVal.txt").
acc_type
Character string; the type of protein accessions in one of
c("refseq_acc", "uniprot_acc", "uniprot_id")
qzhang503/proteoQ documentation built on April 13, 2025, 8:31 a.m.
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| replace_na_genes | R Documentation |
Replaces NA genes (not currently used)
Description
Replaces NA genes (not currently used)
Usage
replace_na_genes(df, acc_type)
Arguments
df |
The name of a primary data file. By default, it will be determined
automatically after matching the types of data and analysis with an
|
acc_type |
Character string; the type of protein accessions in one of c("refseq_acc", "uniprot_acc", "uniprot_id") |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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