rm_cols_mqpsm: Removes columns from PSM table

rm_cols_mqpsmR Documentation

Removes columns from PSM table

Description

Removes columns from PSM table

Usage

rm_cols_mqpsm(df = NULL, group_psm_by = "pep_seq", set_idx = 1L)

Arguments

df

PSM data

group_psm_by

A character string specifying the method in PSM grouping. At the pep_seq default, descriptive statistics will be calculated based on the same pep_seq groups. At the pep_seq_mod alternative, peptides with different variable modifications will be treated as different species and descriptive statistics will be calculated based on the same pep_seq_mod groups.

set_idx

Numeric. The index of a multiplex TMT experiment in metadata files such as label_scheme.xlsx and frac_scheme.xlsx.


qzhang503/proteoQ documentation built on Dec. 14, 2024, 12:27 p.m.