set_cutpoints2: A wrapper of 'set_cutpoint'.
In qzhang503/proteoQ: Processing and Informatic Analysis of Mass Spectrometrirc Data
set_cutpoints2 R Documentation
A wrapper of set_cutpoint.
Description
A wrapper of set_cutpoint.
Usage
set_cutpoints2(cut_points, df)
Arguments
cut_points
A named, numeric vector defines the cut points (knots) in
histograms. The default is cut_points = c(mean_lint = NA) where the
cut points correspond to the quantile values under column mean_lint
(mean log10 intensity) of input data. Values of log2FC will be then
binned from -Inf to Inf according to the cut points. To disable
data binning, set cut_points = Inf or -Inf. The binning of
log2FC can also be achieved through a different numeric column,
e.g., cut_points = c(prot_icover = seq(.25, .75, .25)). See also
mergePep for data alignment with binning.
df
A data frame.
qzhang503/proteoQ documentation built on March 16, 2024, 5:27 a.m.
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| set_cutpoints2 | R Documentation |
A wrapper of set_cutpoint.
Description
A wrapper of set_cutpoint.
Usage
set_cutpoints2(cut_points, df)
Arguments
cut_points |
A named, numeric vector defines the cut points (knots) in
histograms. The default is |
df |
A data frame. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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