update_frac_smry: Updates pre-existed frac_smry.xlsx.

In qzhang503/proteoQ: Processing and Informatic Analysis of Mass Spectrometrirc Data

Updates pre-existed frac_smry.xlsx.

Description

Updates pre-existed frac_smry.xlsx.

Usage

update_frac_smry(
  frac_smry = "frac_smry.xlsx",
  expt_smry = "expt_smry",
  dat_dir = NULL,
  label_scheme_full = NULL,
  ext = "xlsx",
  tbl_mascot = NULL,
  tbl_lfq = NULL,
  is_tmt = TRUE
)

Arguments

frac_smry	A character string to a .xlsx file containing peptide fractionation summary. The default is frac_smry.xlsx.
expt_smry	A character string to a .xlsx file containing the metadata of TMT or LFQ experiments. The default is expt_smry.xlsx.
dat_dir	A character string to the working directory. The default is to match the value under the global environment.
label_scheme_full	The metadata of expt_smry.
ext	The extension of a file name.
tbl_mascot	A table of message for Mascot workflow.
tbl_lfq	A table of message for LFQ workflow.
is_tmt	Logical; is TMT experiments or not.

qzhang503/proteoQ documentation built on March 16, 2024, 5:27 a.m.