plot_rich_bt_ts: Plot Richness and Bottom Temperature Time Series

In rBatt/trawlDiversity: Long-term changes in species richness along the North American coastline

Description

Plots "naive" richness (just counting species in data), MSOM richness, and bottom temperature

Usage

plot_rich_bt_ts(prn, Figures, FUN = "dev.new", ...)

Arguments

prn	the p object (processed msom; output from process_msomStatic)
Figures	option list to which the figure and its information should be added
FUN	graphical device function
...	arguments passed to plot_device

Details

The function uses unpack_p to get much of the information it needs. The Figures object is a list whose first level is intended to be the region. The second level is specific to each figure. The third level has 3 elements: 'figure', 'name', and 'dim'. The 'figure' element is the result of using recordPlot on what is plotted. The name of the figure is, e.g., what the saved figure would be called. The dim is the width and height (in that order) in inches.

Value

Returns the Figure object

See Also

There are several functions that are run through the process_msom_figures script. Richness and temperature plots are plot_btemp_map, plot_rich_bt_scatter, and plot_rich_bt_ts. Figures for colonization, extinction, and the species and places associated with those processes are plot_ce_wrap, plot_col_vs_unobsSpp, plot_colExt_perStrat, and plot_rank_temp. Figures for diagnostics are plot_traceplot and plot_post_corr.

rBatt/trawlDiversity documentation built on Aug. 14, 2021, 1:01 p.m.