estimate_mdiff_two: Estimates for a two-group study with a continuous outcome...

In rcalinjageman/esci: Estimation Statistics with Confidence Intervals

Estimates for a two-group study with a continuous outcome variable

Description

Returns object estimate_mdiff_two is suitable for a simple two-group design with a continuous outcome variable. It provides estimates and CIs for the population mean difference between the repeated measures, the standardized mean difference (SMD; Cohen's d) between the repeated measures, and the median difference between the repeated measures (raw data only). You can pass raw data or summary data.

Usage

estimate_mdiff_two(
  data = NULL,
  outcome_variable = NULL,
  grouping_variable = NULL,
  comparison_mean = NULL,
  comparison_sd = NULL,
  comparison_n = NULL,
  reference_mean = NULL,
  reference_sd = NULL,
  reference_n = NULL,
  grouping_variable_levels = NULL,
  outcome_variable_name = "My outcome variable",
  grouping_variable_name = "My grouping variable",
  conf_level = 0.95,
  assume_equal_variance = FALSE,
  save_raw_data = TRUE,
  switch_comparison_order = FALSE
)

Arguments

data	For raw data - a data.frame or tibble
outcome_variable	For raw data - The column name of the outcome variable, or a vector of numeric data
grouping_variable	For raw data - The column name of the grouping variable, or a vector of group names
comparison_mean	For summary data, a numeric
comparison_sd	For summary data, numeric > 0
comparison_n	For summary data, a numeric integer > 0
reference_mean	For summary data, a numeric
reference_sd	For summary data, numeric > 0
reference_n	For summary data, a numeric integer > 0
grouping_variable_levels	For summary data - An optional vector of 2 group labels
outcome_variable_name	Optional friendly name for the outcome variable. Defaults to 'My outcome variable' or the outcome variable column name if a data frame is passed.
grouping_variable_name	Optional friendly name for the grouping variable. Defaults to 'My grouping variable' or the grouping variable column name if a data.frame is passed.
conf_level	The confidence level for the confidence interval. Given in decimal form. Defaults to 0.95.
assume_equal_variance	Defaults to FALSE
save_raw_data	For raw data; defaults to TRUE; set to FALSE to save memory by not returning raw data in estimate object
switch_comparison_order	Defaults to FALSE

Details

Reach for this function in place of an independent-samples t-test.

Once you generate an estimate with this function, you can visualize it with plot_mdiff() and you can test hypotheses with test_mdiff().

The estimated mean differences are from statpsych::ci.mean2().

The estimated SMDs are from CI_smd_ind_contrast().

The estimated median differences are from statpsych::ci.median2().

Value

Returns object of class esci_estimate

• es_mean_difference

  • type -

  • outcome_variable_name -

  • grouping_variable_name -

  • effect -

  • effect_size -

  • LL -

  • UL -

  • SE -

  • df -

  • ta_LL -

  • ta_UL -

• es_median_difference

  • type -

  • outcome_variable_name -

  • grouping_variable_name -

  • effect -

  • effect_size -

  • LL -

  • UL -

  • SE -

  • ta_LL -

  • ta_UL -

• es_smd

  • outcome_variable_name -

  • grouping_variable_name -

  • effect -

  • effect_size -

  • LL -

  • UL -

  • numerator -

  • denominator -

  • SE -

  • df -

  • d_biased -

• es_mean_ratio

  • outcome_variable_name -

  • grouping_variable_name -

  • effect -

  • effect_size -

  • LL -

  • UL -

  • comparison_mean -

  • reference_mean -

• es_median_ratio

  • outcome_variable_name -

  • grouping_variable_name -

  • effect -

  • effect_size -

  • LL -

  • UL -

  • comparison_median -

  • reference_median -

• overview

  • outcome_variable_name -

  • grouping_variable_name -

  • grouping_variable_level -

  • mean -

  • mean_LL -

  • mean_UL -

  • median -

  • median_LL -

  • median_UL -

  • sd -

  • min -

  • max -

  • q1 -

  • q3 -

  • n -

  • missing -

  • df -

  • mean_SE -

  • median_SE -

• raw_data

  • grouping_variable -

  • outcome_variable -

Examples

# From raw data
data("data_penlaptop1")

estimate_from_raw <- esci::estimate_mdiff_two(
  data = data_penlaptop1,
  outcome_variable = transcription,
  grouping_variable = condition,
  switch_comparison_order = TRUE,
  assume_equal_variance = TRUE
)

# To visualize the estimated median difference (raw data only)
myplot_from_raw <- esci::plot_mdiff(
  estimate_from_raw,
  effect_size = "median"
)

# To conduct a hypothesis test
res_htest_from_raw <- esci::test_mdiff(
  estimate_from_raw,
  effect_size = "median",
  rope = c(-2, 2)
)


# From summary data
estimate_from_summary <- esci::estimate_mdiff_two(
  comparison_mean = 12.09,
  comparison_sd = 5.52,
  comparison_n = 103,
  reference_mean = 6.88,
  reference_sd = 4.22,
  reference_n = 48,
  grouping_variable_levels = c("Ref-Laptop", "Comp-Pen"),
  outcome_variable_name = "% Transcription",
  grouping_variable_name = "Note-taking type",
  assume_equal_variance = TRUE
)

# To visualize the estimated mean difference
myplot <- esci::plot_mdiff(
  estimate_from_summary,
  effect_size = "mean"
)

# To conduct a hypothesis test
res_htest_from_summary <- esci::test_mdiff(
  estimate_from_summary,
  effect_size = "mean",
  rope = c(-2, 2)
)

rcalinjageman/esci documentation built on March 29, 2024, 7:30 p.m.