samFDR: Compute Permutation-based FDR as in SAM

Description Usage Arguments

View source: R/stats.R

Description

Compute Permutation-based FDR as in SAM

Usage

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samFDR(obs, perms, alternative = c("two.sided", "greater", "less"),
  digit = 2)

Arguments

obs

observed statistics

perms

matrix of statistics obtained for each permutation (column).

alternative

alternative hypothesis to test

digit

FDR precision in number of digits


renozao/xbioc documentation built on Aug. 27, 2018, 6:56 a.m.