R/actino_data.R

In richardsprague/actino: Phyloseq utilities for personal microbiome

# actino_data.R
# dataset for ub.phyloseq

#' microbiome data available to ub.phyloseq
#'
#' sample data frame showing one kombucha sample
#'
#' @docType data
#'
#' @usage data(kombucha.csv)
#'
#' @keywords microbiome
#'
"kombucha.csv"



#' microbiome data available to ub.phyloseq
#'
#' Series of 19 samples during a kombucha experiment (genus level only)
#'
#' @docType data
#'
#' @usage data(kombucha.genus)
#'
#' @keywords microbiome
#'
"kombucha.genus"


#' microbiome data available to ub.phyloseq
#'
#' Series of 19 samples during a kombucha experiment (all ranks)
#'
#' @docType data
#'
#' @usage data(kombucha.all_ranks)
#'
#' @keywords microbiome
#'
"kombucha.all_ranks"