convert_bim_table_to_map_table: Convert a 'PLINK' '.bim' table to a 'PLINK' '.map' table

In richelbilderbeek/plinkr: Interface to PLINK

Convert a PLINK .bim table to a PLINK .map table

Description

Convert a PLINK .bim table to a PLINK .map table

Usage

convert_bim_table_to_map_table(bim_table, verbose = FALSE)

Arguments

bim_table	a tibble of the genetic mapping, with as many rows as SNPs. Each row contains: chr: the chromosome number id: the SNP ID posg: the position pos: the position ref: something alt: something Use get_test_bim_table to get a .bim table as used in testing. Use read_plink_bim_file to read a PLINK .bim file. Use check_bim_table to test if a .bim table is valid.
verbose	the verbosity of a function. Set to TRUE for more output. Use check_verbose to detect if this argument is valid.

Value

a PLINK .map table

Author(s)

Richèl J.C. Bilderbeek

richelbilderbeek/plinkr documentation built on March 25, 2024, 3:18 p.m.