convert_plink_bin_files_to_plink_vcf_files: Convert PLINK binary files to PLINK VCF files
In richelbilderbeek/plinkr: Interface to PLINK

View source: R/convert_plink_bin_files_to_plink_vcf_files.R

convert_plink_bin_files_to_plink_vcf_files

R Documentation

Convert PLINK binary files to PLINK VCF files

Description

Convert PLINK binary files to PLINK VCF files

Usage

convert_plink_bin_files_to_plink_vcf_files(
  base_input_filename,
  base_output_filename,
  plink_options = create_plink_options(),
  verbose = FALSE
)

Arguments

`base_input_filename`	the base of the filenames that are used as input for `PLINK`/`PLINK2`
`base_output_filename`	the base of the filenames that are used as output for `PLINK`/`PLINK2`
`plink_options`	options to run PLINK, as created by create_plink_options
`verbose`	the verbosity of a function. Set to TRUE for more output. Use check_verbose to detect if this argument is valid.