create_convert_plink_bin_files_to_plink_text_files_args: Create the command-line arguments to convert PLINK binary...

In richelbilderbeek/plinkr: Interface to PLINK

Create the command-line arguments to convert PLINK binary files to PLINK text files

Description

Create the command-line arguments to convert PLINK binary files to PLINK text files

Usage

create_convert_plink_bin_files_to_plink_text_files_args(
  base_input_filename,
  base_output_filename,
  plink_options = create_plink_v1_9_options()
)

Arguments

base_input_filename	the base of the filenames that are used as input for PLINK/PLINK2
base_output_filename	the base of the filenames that are used as output for PLINK/PLINK2
plink_options	options to run PLINK, as created by create_plink_options

Value

the command-line arguments

Note

the first argument is the first argument, not the path to the PLINK or PLINK2 binary

Author(s)

Richèl J.C. Bilderbeek

Examples

create_convert_plink_bin_files_to_plink_text_files_args(
  base_input_filename = "base_input_filename",
  base_output_filename = "base_output_filename"
)

richelbilderbeek/plinkr documentation built on March 25, 2024, 3:18 p.m.