get_n_snps_from_pvar_table: Get the number of SNPs from a '.pvar' table
In richelbilderbeek/plinkr: Interface to PLINK
get_n_snps_from_pvar_table R Documentation
Get the number of SNPs from a .pvar table
Description
Get the number of SNPs from a .pvar table
Usage
get_n_snps_from_pvar_table(pvar_table)
Arguments
pvar_table
a tibble with as much rows as
SNPs. It has the following columns:
-
CHROM: the chromosome
-
POS: the position on the chromosome
-
ID: the SNP ID
-
REF: the reference variant
-
ALT: the alternate variant
The uppercase column names are those as used by PLINK2.
Value
the number of SNPs
richelbilderbeek/plinkr documentation built on March 25, 2024, 3:18 p.m.
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| get_n_snps_from_pvar_table | R Documentation |
Get the number of SNPs from a .pvar table
Description
Get the number of SNPs from a .pvar table
Usage
get_n_snps_from_pvar_table(pvar_table)
Arguments
pvar_table |
a tibble with as much rows as SNPs. It has the following columns:
The uppercase column names are those as used by PLINK2. |
Value
the number of SNPs
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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