get_test_map_table: Get a simple genetic mapping ('.map') table

In richelbilderbeek/plinkr: Interface to PLINK

Get a simple genetic mapping (.map) table

Description

Get a simple genetic mapping (.map) table, as can be used in testing. This is the same table as can be obtained by reading the PLINK v1.7 example file called test.map.

Usage

get_test_map_table()

Value

a mapping (.map) table

Note

The function has the word get in its name, as getting the result is trivial. When getting the result is non-trivial, the word create is used.

Author(s)

Richèl J.C. Bilderbeek

See Also

use create_demo_map_table to get simulated genetic mapping tables

Examples

get_test_map_table()

# Get the genetic map from the original PLINK v1.7 example file
if (is_plink_installed(create_plink_v1_7_options())) {
  map_filename <- get_plink_example_filename(
    example_filename = "test.map",
    create_plink_v1_7_options()
  )
  read_plink_map_file(map_filename)
}

richelbilderbeek/plinkr documentation built on March 25, 2024, 3:18 p.m.