is_assoc_qt_data: Determine if the 'assoc_qt_data' is indeed data used for a...

In richelbilderbeek/plinkr: Interface to PLINK

Determine if the assoc_qt_data is indeed data used for a quantitative trait analysis (as done by assoc_qt)

Description

Determine if the assoc_qt_data is indeed data used for a quantitative trait analysis (as done by assoc_qt)

Usage

is_assoc_qt_data(assoc_qt_data)

Arguments

assoc_qt_data

data use to used by assoc_qt (as created by create_assoc_qt_data), which equals 'regular' data (see check_data) and a phenotype table/file

Value

TRUE if the assoc_qt_data is indeed data used for a quantitative trait analysis (as done by assoc_qt)

Author(s)

Richèl J.C. Bilderbeek

See Also

plinkr has multiple functions to test if a type of data is valid:

• PLINK text data: use is_plink_text_data

• PLINK binary data: use is_plink_bin_data

• PLINK2 binary data: use is_plink2_bin_data

• any type of PLINK/PLINK2 data: use is_data

• associative trait analysis data: use is_assoc_qt_data

Examples

assoc_qt_data <- create_test_assoc_qt_data()
is_assoc_qt_data(assoc_qt_data)

richelbilderbeek/plinkr documentation built on March 25, 2024, 3:18 p.m.