is_bim_table: Determine if a '.bim' table is valid.

In richelbilderbeek/plinkr: Interface to PLINK

Determine if a .bim table is valid.

Description

Determine if a .bim table is valid.

Usage

is_bim_table(bim_table, verbose = FALSE)

Arguments

bim_table	a tibble of the genetic mapping, with as many rows as SNPs. Each row contains: chr: the chromosome number id: the SNP ID posg: the position pos: the position ref: something alt: something Use get_test_bim_table to get a .bim table as used in testing. Use read_plink_bim_file to read a PLINK .bim file. Use check_bim_table to test if a .bim table is valid.
verbose	the verbosity of a function. Set to TRUE for more output. Use check_verbose to detect if this argument is valid.

Value

TRUE if the table is a valid .bim table

Author(s)

Richèl J.C. Bilderbeek

See Also

use check_bim_table to check if a table is a valid .bim table (i.e. stop if it is not)

Examples

is_bim_table(get_test_bim_table())
is_bim_table("nonsense")

richelbilderbeek/plinkr documentation built on March 25, 2024, 3:18 p.m.