rmflight/categoryCompare
Meta-analysis of high-throughput experiments using feature annotations

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Search the rmflight/categoryCompare package
Functions
188
Source code
11
Man pages
32
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rmflight/categoryCompare: Meta-analysis of high-throughput experiments using feature annotations
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API

API for rmflight/categoryCompare
Meta-analysis of high-throughput experiments using feature annotations

Global functions
GENccEnrichResult Man page
GENccEnrichResult,ccCompareGeneric-method Man page
GENccEnrichResult-class Man page
GOHyperGParams Man page
GOHyperGParams-class Man page
GOHyperGParamsCC Man page
GOHyperGParamsCC-class Man page
GOHyperGResultCC Man page
GOHyperGResultCC-class Man page
GOccEnrichResult Man page
GOccEnrichResult-class Man page
HyperGParamsCC Man page
HyperGParamsCC-class Man page
HyperGResultCC Man page
HyperGResultCC-class Man page
KEGGHyperGParams Man page
KEGGHyperGParams-class Man page
KEGGHyperGParamsCC Man page
KEGGHyperGParamsCC-class Man page
KEGGHyperGResultCC Man page
KEGGHyperGResultCC-class Man page
KEGGccEnrichResult Man page
KEGGccEnrichResult-class Man page
[,GENccEnrichResult,ANY,ANY,ANY-method Man page
[,GENccEnrichResult,ANY,ANY-method Man page
[,ccEnrichResult,ANY,ANY,ANY-method Man page
[,ccEnrichResult,ANY,ANY-method Man page
allAnnotation Man page
allAnnotation,ccCompareResult-method Man page
annotation,ccSigList-method Man page
breakEdges Man page
breakEdges,ccCompareResult,numeric-method Man page
breakEdges,numeric,numeric-method Man page
breakEdges-methods Man page
category,GENccEnrichResult-method Man page
category,ccSigList-method Man page
categoryCompare Man page
categoryCompare-package Man page
ccCompare Man page
ccCompare,GENccEnrichResult,ccOptions-method Man page
ccCompare,GOccEnrichResult,ccOptions-method Man page
ccCompare,KEGGccEnrichResult,ccOptions-method Man page
ccCompare,ccEnrichCollection,ccOptions-method Man page
ccCompare-methods Man page
ccCompareCollection Man page
ccCompareCollection-class Man page
ccCompareGeneric Man page
ccCompareGeneric,GENccEnrichResult,ccOptions-method Man page
ccCompareGeneric-methods Man page
ccCompareResult Man page
ccCompareResult-class Man page
ccData Man page
ccEnrich Man page
ccEnrich,ccGeneList-method Man page
ccEnrich-method Man page
ccEnrichCollection Man page
ccEnrichCollection-class Man page
ccEnrichResult Man page
ccEnrichResult-class Man page
ccGeneList Man page
ccGeneList-class Man page
ccOptions Man page
ccOptions,ccCompareGeneric-method Man page
ccOptions-class Man page
ccOpts Man page
ccOutCyt Man page
ccOutCyt,ccCompareResult,ccOptions-method Man page
ccOutCyt-methods Man page
ccResults Man page
ccResultsBPHier Man page
ccSigList Man page
ccSigList-class Man page
ccType Man page
ccType,ccGeneList-method Man page
ccType<- Man page
ccType<-,ccGeneList-method Man page
compareColors Man page
compareColors,ccOptions-method Man page
compareColors<- Man page
compareColors<-,ccOptions-method Man page
compareIndx Man page
compareIndx,ccOptions-method Man page
compareNames Man page
compareNames,ccOptions-method Man page
compareNames<- Man page
compareNames<-,ccOptions-method Man page
cssClass Man page
cssClass,ccOptions-method Man page
cwReload Man page
cwReload,numeric,ccOptions-method Man page
cwReload,numeric,character,ccOptions-method Man page
cwReload-methods Man page
cytOutData Man page
cytOutData,list,ccCompareResult,mergedData-method Man page
cytOutData,list,ccCompareResult,missing-method Man page
cytOutData,list,missing,missing-method Man page
cytOutData-methods Man page
cytOutNodes Man page
cytOutNodes,character,numeric,list-method Man page
cytOutNodes,character,numeric,missing-method Man page
cytOutNodes-methods Man page
enrichLists Man page
fdr Man page
fdr,HyperGParamsCC-method Man page
fdr,HyperGResultCC-method Man page
fdr,ccEnrichResult-method Man page
fdr,ccGeneList-method Man page
fdr<- Man page
fdr<-,HyperGParamsCC-method Man page
fdr<-,ccGeneList-method Man page
fdrvalues Man page
fdrvalues,HyperGResultCC-method Man page
fdrvalues-method Man page
gUniverse Man page
geneAnnMapping Man page
geneAnnMapping,GENccEnrichResult-method Man page
geneLists Man page
getAnnotation Man page
getGO2ALLEGS Man page
getGeneName Man page
getGeneSymbol Man page
getPATH2EG Man page
graphType Man page
graphType,GENccEnrichResult-method Man page
graphType,ccEnrichCollection-method Man page
graphType,ccEnrichResult-method Man page
graphType-methods Man page
graphType<- Man page
graphType<-,GENccEnrichResult-method Man page
graphType<-,ccEnrichCollection-method Man page
graphType<-,ccEnrichResult-method Man page
gseaRes Man page
hyperGTestCC Man page
hyperGTestCC,HyperGParamsCC Man page
hyperGTestCC,HyperGParamsCC-method Man page
listNames Man page
listNames,ccGeneList-method Man page
listNames,ccOptions-method Man page
listNames<-,ccOptions-method Man page
mainGraph Man page
mainGraph,ccCompareResult-method Man page
mainTable Man page
mainTable,ccCompareResult-method Man page
mergeLists Man page
mergeLists,ccGeneList,ccOptions-method Man page
mergeLists-methods Man page
mergedData-class Man page
minCount Man page
minCount,HyperGResultCC-method Man page
minCount,ccEnrichResult-method Man page
minCount<- Man page
minCount<-,HyperGResultCC-method Man page
minCount<-,ccEnrichCollection-method Man page
minCount<-,ccEnrichResult-method Man page
minNodes Man page
minNodes,CytoscapeWindowClass,numeric-method Man page
ontology,GENccEnrichResult-method Man page
ontology,ccSigList-method Man page
outType Man page
outType,ccOptions-method Man page
outType<- Man page
outType<-,ccOptions-method Man page
pCC,HyperGResultCC-method Man page
pvalueCutoff,ccEnrichResult-method Man page
pvalueCutoff,ccGeneList-method Man page
pvalueCutoff<-,HyperGResultCC-method Man page
pvalueCutoff<-,ccEnrichCollection-method Man page
pvalueCutoff<-,ccEnrichResult-method Man page
pvalueCutoff<-,ccGeneList-method Man page
pvalueType Man page
pvalueType,HyperGResultCC-method Man page
pvalueType,ccEnrichResult-method Man page
pvalueType<- Man page
pvalueType<-,HyperGResultCC-method Man page
pvalueType<-,ccEnrichCollection-method Man page
pvalueType<-,ccEnrichResult-method Man page
resetColors Man page
resetColors,numeric,ccOptions-method Man page
resetColors-methods Man page
show,HyperGResultCC-method Man page
show-methods Man page
sigID Man page
sigID,ccSigList-method Man page
summary,HyperGResultCC-method Man page
summary-methods Man page
table10 Man page
table48 Man page
testDirection,ccGeneList-method Man page
rmflight/categoryCompare documentation built on May 27, 2019, 9:30 a.m.

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