getDensityKernelMode: Mode of the Density Kernel
In robertdouglasmorrison/DuffyTools: Duffy Lab Utility Tools
getDensityKernelMode R Documentation
Mode of the Density Kernel
Description
Calculate the mode of the density kernel function
Usage
getDensityKernelMode(v)
Arguments
v
numeric vector of values, typically gene or oligo expression abundance
Details
This function is used in RMA normalization to estimate the amount
of non-specific hybridization on a microarray.
Value
a numeric value on length 1, representing the most frequent value
in the distribution of v.
Note
Uses the 'epanechnikov' kernel. See density.
See Also
duffyRMA, DKMshift
Examples
getDensityKernelMode( rnorm( 100, mean=10, sd=2))
robertdouglasmorrison/DuffyTools documentation built on Sept. 13, 2024, 4:51 p.m.
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| getDensityKernelMode | R Documentation |
Mode of the Density Kernel
Description
Calculate the mode of the density kernel function
Usage
getDensityKernelMode(v)
Arguments
v |
numeric vector of values, typically gene or oligo expression abundance |
Details
This function is used in RMA normalization to estimate the amount of non-specific hybridization on a microarray.
Value
a numeric value on length 1, representing the most frequent value
in the distribution of v.
Note
Uses the 'epanechnikov' kernel. See density.
See Also
duffyRMA, DKMshift
Examples
getDensityKernelMode( rnorm( 100, mean=10, sd=2))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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