Description Usage Arguments Details Value See Also

Get various statistical measurement metrics about a matrix of expression data, typically of microarray oligo/gene intensities

1 |

`m` |
a numeric matrix of expression values, with a row for each gene/oligo and a column for each sample |

This function measures several metrics about the data, all of which may be useful for the various types of data normalization common to microarrays.

A list of numeric scalars. For each scalar, the mean of that metric measured separately for each sample, is the value reported.

`mean ` |
the average mean of each column of |

`median ` |
the average median of each column of |

`floor ` |
the average floor of each column of |

`max ` |
the average max of each column of |

`min ` |
the average min of each column of |

`logmean ` |
the average logmean (geometric mean) of each column of |

`baseline ` |
the average baseline of each column of |

`DKM ` |
the average DKM (Density Kernel Mode) of each column of |

robertdouglasmorrison/DuffyTools documentation built on Dec. 14, 2018, 3:05 p.m.

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